Reference: Luc PV and Tempst P (2004) PINdb: a database of nuclear protein complexes from human and yeast. Bioinformatics 20(9):1413-5

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Abstract

CONCLUSIONS: Proteins Interacting in the Nucleus database (PINdb) is a database of protein complexes purified from the nucleus of human and yeast cells. It is compiled from the published literature and existing databases. Currently, PINdb contains mostly protein complexes that may be involved in gene transcription. To facilitate comparative analyses and identification of protein complexes, the compositional information is integrated with standardized gene nomenclature, annotation and protein sequences from public databases. The PINdb web interface provides a number of tools for (1) comparison of protein complexes, (2) search for a protein complex by its published name or by a partial list of its components and (3) browsing specific subsets or a functional classification of the complexes. Availablity: http://pin.mskcc.org

Reference Type
Journal Article
Authors
Luc PV, Tempst P
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Interaction Annotations

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Interactor Interactor Type Assay Annotation Action Modification Phenotype Source Reference

Gene Ontology Annotations

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Gene Gene Ontology Term Qualifier Aspect Method Evidence Source Assigned On Annotation Extension Reference

Phenotype Annotations

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Gene Phenotype Experiment Type Mutant Information Strain Background Chemical Details Reference

Regulation Annotations

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Regulator Target Experiment Assay Construct Conditions Strain Background Reference