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Magtanong L, et al.  (2011) Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell. Nat Biotechnol ()

Abstract: Dosage suppression is a genetic interaction in which overproduction of one gene rescues a mutant phenotype of another gene. Although dosage suppression is known to map functional connections among genes, the extent to which it might illuminate global cellular functions is unclear. Here we analyze a network of interactions linking dosage suppressors to 437 essential genes in yeast. For 424 genes, we curated interactions from the literature. Analyses revealed that many dosage suppression interactions occur between functionally related genes and that the majority do not overlap with other types of genetic or physical interactions. To confirm the generality of these network properties, we experimentally identified dosage suppressors for 29 genes from pooled populations of temperature-sensitive mutant cells transformed with a high-copy molecular-barcoded open reading frame library, MoBY-ORF 2.0. We classified 87% of the 1,640 total interactions into four general types of suppression mechanisms, which provided insight into their relative frequencies. This work suggests that integrating the results of dosage suppression studies with other interaction networks could generate insights into the functional wiring diagram of a cell.

Status: Epub ahead of print Type: Journal Article PubMed ID: 21572441

Topics addressed in this paper

Number of different genes curated to this paper: 19

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
BCY1 CCL1 DSN1 FCF1 GIS2 GPB1 GPB2 HCM1 MED4 NSL1
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Genetic Interactions blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Omics yg ball
Primary Literature blue ball
Techniques and Reagents yg ball

Topics Genes linked to topics (#11 - 19 )
RPN11 SCC4 SEC17 SEC18 SEC26 SEC3 SPC105 SSO1 SSO2
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Genetic Interactions blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

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