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Weidberg H, et al.  (2011) Biogenesis and cargo selectivity of autophagosomes. Annu Rev Biochem 80():125-56

Abstract: Autophagy is a major catabolic pathway in eukaryotes, which is required for the lysosomal/vacuolar degradation of cytoplasmic proteins and organelles. Interest in the autophagy pathway has recently gained momentum largely owing to identification of multiple autophagy-related genes and recognition of its involvement in various physiological conditions. Here we review current knowledge of the molecular mechanisms regulating autophagy in mammals and yeast, specifically the biogenesis of autophagosomes and the selectivity of their cargo recruitment. We discuss the different steps of autophagy, from the signal transduction events that regulate it to the completion of this pathway by fusion with the lysosome/vacuole. We also review research on the origin of the autophagic membrane, the molecular mechanism of autophagosome formation, and the roles of two ubiquitin-like protein families and other structural elements that are essential for this process. Finally, we discuss the various modes of autophagy and highlight their functional relevance for selective degradation of specific cargos.

Status: Published Type: Journal Article PubMed ID: 21548784

Topics addressed in this paper

Number of different genes curated to this paper: 69

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Topics Genes linked to topics (#1 - 10 )
AMS1 APE1 ARF1 ARF2 ARP2 ATG1 ATG10 ATG11 ATG12 ATG13
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Topics Genes linked to topics (#11 - 20 )
ATG14 ATG15 ATG16 ATG17 ATG18 ATG19 ATG2 ATG20 ATG21 ATG22
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Topics Genes linked to topics (#21 - 30 )
ATG23 ATG26 ATG27 ATG29 ATG3 ATG31 ATG32 ATG33 ATG34 ATG4
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Topics Genes linked to topics (#31 - 40 )
ATG5 ATG7 ATG8 ATG9 BET3 BET5 BRE5 CDC48 DOA1 HSV2
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Topics Genes linked to topics (#41 - 50 )
PEX14 PTC6 SEC12 SEC18 SEC2 SEC7 SLT2 SNX4 TCA17 TLG2
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Topics Genes linked to topics (#51 - 60 )
TRS120 TRS130 TRS20 TRS23 TRS31 TRS33 TRS65 TRS85 UBP3 UTH1
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Topics Genes linked to topics (#61 - 69 )
VAM3 VPS15 VPS30 VPS34 VPS38 VPS45 VPS52 YPT1 YPT7
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