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Burtner CR, et al.  (2011) A genomic analysis of chronological longevity factors in budding yeast. Cell Cycle 10(9):1385-96

Abstract: Chronological life span (CLS) has been studied as an aging paradigm in yeast. A few conserved aging genes have been identified that modulate both chronological and replicative longevity in yeast as well as longevity in the nematode Caenorhabditis elegans; however, a comprehensive analysis of the relationship between genetic control of chronological longevity and aging in other model systems has yet to be reported. To address this question, we performed a functional genomic analysis of chronological longevity for 550 single-gene deletion strains, which accounts for approximately 12% of the viable homozygous diploid deletion strains in the yeast ORF deletion collection. This study identified 33 previously unknown determinants of CLS. We found no significant enrichment for enhanced CLS among deletions corresponding to yeast orthologs of worm aging genes or among replicatively long-lived deletion strains, although a trend toward overlap was noted. In contrast, a subset of gene deletions identified from a screen for reduced acidification of culture media during growth to stationary phase was enriched for increased CLS. These results suggest that genetic control of CLS under the most commonly utilized assay conditions does not strongly overlap with longevity determinants in C. elegans, with the existing confined to a small number of genetic pathways. These data also further support the model that acidification of the culture medium plays an important role in survival during chronological aging in synthetic medium, and suggest that chronological aging studies using alternate medium conditions may be more informative with regard to aging of multicellular eukaryotes.

Status: Published Type: Journal Article PubMed ID: 21447998

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Number of different genes curated to this paper: 147

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BRE1 BRO1 CBP4 CCR4 CCW12 CDC10 CIN8 CLC1 COG1 COQ5
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COX16 COX6 CPR6 CTF8 CYC3 CYT1 CYT2 DHH1 DIA4 DOA4
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ERG5 FMP41 FOX2 FZO1 GCN2 GIN4 GOS1 GPA1 GPR1 GYP7
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HFM1 HIR3 HOM6 ICT1 ICY2 ISM1 LYS4 MDM30 MEF1 MIG3
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MIR1 MOT2 MRM1 MRP21 MRPL10 MRPL13 MRS3 MSG5 MTO1 NAM2
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Topics Genes linked to topics (#61 - 70 )
NGL1 NRT1 NSR1 OXA1 PER33 PEX10 PHM6 PHO2 PHO85 PKH1
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Topics Genes linked to topics (#71 - 80 )
PKH2 PRK1 QCR7 RCK2 RHR2 RIP1 RPL11B RPL19A RPL19B RPL27A
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Topics Genes linked to topics (#81 - 90 )
RPL37B RPL9A RPS0B RPS11A RPS27B RPS4B RRG1 RSM19 RSM24 RVS167
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Topics Genes linked to topics (#91 - 100 )
SCH9 SCP160 SET2 SFC1 SGS1 SIF2 SKP2 SLG1 SLM6 SOK1
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Topics Genes linked to topics (#101 - 110 )
SPT20 SPT3 SSA1 SUB1 SWD1 SWD3 SWI4 SYH1 TAF14 TED1
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Topics Genes linked to topics (#111 - 120 )
TGL5 TLG2 TMA23 TOM5 TPK1 TRP5 UBA4 VID30 VMA2 VPH1
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Topics Genes linked to topics (#121 - 130 )
VPS1 VPS20 VPS25 VPS34 VPS51 WHI2 WHI3 YAP1801 YBR238C YDL041W
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Topics Genes linked to topics (#131 - 140 )
YDR433W YDR541C YGR219W YIA6 YIL077C YIM2 YJL007C YJL107C YLR402W YMR226C
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Topics Genes linked to topics (#141 - 147 )
YNL184C YOR1 YOR111W YPT32 YPT6 YTA12 YVH1
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