SGD Paper 
Tuller T, et al. (2010) An evolutionarily conserved mechanism for controlling the efficiency of protein translation. Cell 141(2):344-54
Abstract: Recent years have seen intensive progress in measuring protein translation. However, the contributions of coding sequences to the efficiency of the process remain unclear. Here, we identify a universally conserved profile of translation efficiency along mRNAs computed based on adaptation between coding sequences and the tRNA pool. In this profile, the first approximately 30-50 codons are, on average, translated with a low efficiency. Additionally, in eukaryotes, the last approximately 50 codons show the highest efficiency over the full coding sequence. The profile accurately predicts position-dependent ribosomal density along yeast genes. These data suggest that translation speed and, as a consequence, ribosomal density are encoded by coding sequences and the tRNA pool. We suggest that the slow "ramp" at the beginning of mRNAs serves as a late stage of translation initiation, forming an optimal and robust means to reduce ribosomal traffic jams, thus minimizing the cost of protein expression.CI - Copyright 2010 Elsevier Inc. All rights reserved.
| Status: Published | Type: Journal Article | Research Support, Non-U.S. Gov't | PubMed ID: 20403328 |
Topics addressed in this paper
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| Topics | Topics not linked to Genes |
|---|---|
| Computational analysis | 
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| Evolution |
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| Omics |
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| Translational Regulation |
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