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Kovalchuk A and Driessen AJ  (2010) Phylogenetic analysis of fungal ABC transporters. BMC Genomics 11():177

Abstract: ABSTRACT: BACKGROUND: The superfamily of ABC proteins is among the largest known in nature. Its members are mainly, but not exclusively, involved in the transport of a broad range of substrates across biological membranes. Many contribute to multidrug resistance in microbial pathogens and cancer cells. The diversity of ABC proteins in fungi is comparable with those in multicellular animals, but so far fungal ABC proteins have barely been studied. RESULTS: We performed a phylogenetic analysis of the ABC proteins extracted from the genomes of 27 fungal species from 18 orders representing 5 fungal phyla thereby covering the most important groups. Our analysis demonstrated that some of the subfamilies of ABC proteins remained highly conserved in fungi, while others have undergone a remarkable group-specific diversification. Members of the various fungal phyla also differed significantly in the number of ABC proteins found in their genomes, which is especially reduced in the yeast S. cerevisiae and S. pombe. CONCLUSIONS: Data obtained during our analysis should contribute to a better understanding of the diversity of the fungal ABC proteins and provide important clues about their possible biological functions.

Status: Published Type: Journal Article PubMed ID: 20233411

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Number of different genes curated to this paper: 60

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ADP1 ARB1 ATM1 ATP2 AUS1 BPT1 CCC2 DNF1 DNF2 DRS2
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ENA1 ENA2 ENA5 GCN20 HEF3 MDL1 MDL2 NEO1 NEW1 NFT1
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PCA1 PDR1 PDR10 PDR11 PDR12 PDR15 PDR18 PDR5 PMA1 PMA2
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PMC1 PMR1 PXA1 PXA2 RLI1 SNQ2 SPF1 STE6 STV1 VMA1
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Topics Genes linked to topics (#51 - 60 )
VMA9 VMR1 VPH1 YBT1 YCF1 YDR061W YEF3 YKR104W YOL075C YOR1
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