SGD Paper Help



Copic A, et al.  (2009) Genomewide analysis reveals novel pathways affecting endoplasmic reticulum homeostasis, protein modification and quality control. Genetics 182(3):757-69

Abstract: To gain new mechanistic insight into ER homeostasis and the biogenesis of secretory proteins, we screened a genome-wide collection of yeast mutants for defective intracellular retention of the ER chaperone, Kar2p. We identified 87 Kar2p-secreting strains, including a number of known components in secretory protein modification and sorting. Further characterization of the 73 non-essential Kar2p retention mutants revealed roles for a number of novel gene products in protein glycosylation, GPI-anchor attachment, ER quality control, and retrieval of escaped ER residents. A subset of these mutants, required for ER retrieval, included the GET complex and two novel proteins that likely similarly function in membrane insertion of tail-anchored proteins. Finally, the variant histone, Htz1p, and its acetylation state seem to play an important role in maintaining ER retrieval pathways, suggesting a surprising link between chromatin remodeling and ER homeostasis.

Status: Published Type: Journal Article PubMed ID: 19433630

Topics addressed in this paper

Number of different genes curated to this paper: 28

Jump to Summary Chart for:

  • To find other papers on a gene and topic, click on the colored ball in the appropriate box.
  • displays other papers with information about that topic for that gene.
  • displays other papers in SGD that are associated with that topic.
    The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
  • To go to the Locus page for a gene, click on the gene name.
Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ALG3 ARV1 BST1 CSF1 EMP24 ENV10 EOS1 ERP1 ERP2 ERV25
Additional Literature blue ball
Function/Process blue ball blue ball
Genetic Interactions blue ball blue ball blue ball blue ball
Large-scale phenotype analysis yg ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball
Omics yg ball
Primary Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#11 - 20 )
FAT1 GUP1 HAC1 HTZ1 ICS3 KAR2 LHS1 MDY2 MNN11 MRPL16
Additional Literature blue ball blue ball blue ball blue ball
Cellular Location blue ball
Function/Process blue ball blue ball
Genetic Interactions blue ball blue ball blue ball blue ball
Mutants/Phenotypes blue ball blue ball blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball blue ball blue ball
Protein Processing/Modification/Regulation blue ball
Strains/Constructs blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#21 - 28 )
NEM1 OST3 PER1 PHO88 SEC22 TED1 UBX2 YBL083C
Additional Literature blue ball
Function/Process blue ball
Genetic Interactions blue ball blue ball
Mutants/Phenotypes blue ball blue ball
Primary Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Strains/Constructs blue ball blue ball

Author Searches

To find contact information or other publications by the authors of this paper, follow these three steps:
  1. (1) Choose an author,
  2. (2) Choose a search parameter,
  3. (3) Click to implement