SGD Paper Help



Bayer TS, et al.  (2009) Synthetic control of a fitness tradeoff in yeast nitrogen metabolism. J Biol Eng 3:1

Abstract: ABSTRACT: BACKGROUND: Microbial communities are involved in many processes relevant to industrial and medical biotechnology, such as the formation of biofilms, lignocellulosic degradation, and hydrogen production. The manipulation of synthetic and natural microbial communities and their underlying ecological parameters, such as fitness, evolvability, and variation, is an increasingly important area of research for synthetic biology. RESULTS: Here, we explored how synthetic control of an endogenous circuit can be used to regulate a tradeoff between fitness in resource abundant and resource limited environments in a population of Saccharomyces cerevisiae. We found that noise in the expression of a key enzyme in ammonia assimilation, Gdh1p, mediated a tradeoff between growth in low nitrogen environments and stress resistance in high ammonia environments. We implemented synthetic control of an endogenous Gdh1p regulatory network to construct an engineered strain in which the fitness of the population was tunable in response to an exogenously-added small molecule across a range of ammonia environments. CONCLUSIONS: The ability to tune fitness and biological tradeoffs will be important components of future efforts to engineer microbial communities.

Status: Published Type: Journal Article PubMed ID: 19118500

Topics addressed in this paper

Number of different genes curated to this paper: 2

  • To find other papers on a gene and topic, click on the colored ball in the appropriate box.
  • displays other papers with information about that topic for that gene.
  • displays other papers in SGD that are associated with that topic.
    The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
  • To go to the Locus page for a gene, click on the gene name.
Topics Genes linked to topics
DAL80 GDH1
Cell Growth and Metabolism blue ball blue ball
Mutants/Phenotypes blue ball
Primary Literature blue ball blue ball
RNA Levels and Processing blue ball
Strains/Constructs blue ball blue ball
Transcription blue ball blue ball

Author Searches

To find contact information or other publications by the authors of this paper, follow these three steps:
  1. (1) Choose an author,
  2. (2) Choose a search parameter,
  3. (3) Click to implement