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Chandy M, et al.  (2006) SWI/SNF displaces SAGA-acetylated nucleosomes. Eukaryot Cell 5(10):1738-47

Abstract: SWI/SNF is a well-characterized chromatin remodeling complex that remodels chromatin by sliding nucleosomes in cis and/or displacing nucleosomes in trans. The latter mechanism has the potential to remove promoter nucleosomes, allowing access to transcription factors and RNA polymerase. In vivo, histone acetylation often precedes apparent nucleosome loss; therefore, we sought to determine whether nucleosomes containing acetylated histones could be displaced by the SWI/SNF chromatin remodeling complex. We found that SAGA-acetylated histones were lost from an immobilized nucleosome array when treated with the SWI/SNF complex. When the nucleosome array was acetylated by SAGA in the presence of bound transcription activators, it generated a peak of acetylation surrounding the activator binding sites. Subsequent SWI/SNF treatment suppressed this acetylation peak. Immunoblots indicated that SWI/SNF preferentially displaced acetylated histones from the array relative to total histones. Moreover, the Swi2/Snf2 bromodomain, an acetyl-lysine binding domain, played a role in the displacement of acetylated histones. These data indicate that targeted histone acetylation by the SAGA complex predisposes promoter nucleosomes for displacement by the SWI/SNF complex.

Status: Published Type: Journal Article | Research Support, N.I.H., Extramural PubMed ID: 17030999

Topics addressed in this paper

Number of different genes curated to this paper: 50

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Topics Genes linked to topics (#1 - 10 )
ADA2 ARP7 ARP9 CHD1 GCN5 HFI1 HHF1 HHF2 HHT1 HHT2
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Topics Genes linked to topics (#11 - 20 )
HTL1 LDB7 NGG1 NPL6 RSC1 RSC2 RSC3 RSC30 RSC4 RSC58
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Topics Genes linked to topics (#21 - 30 )
RSC6 RSC8 RSC9 RTT102 SFH1 SGF11 SGF29 SGF73 SNF11 SNF12
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Topics Genes linked to topics (#31 - 40 )
SNF2 SNF5 SNF6 SPT20 SPT3 SPT7 SPT8 STH1 SUS1 SWI1
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Topics Genes linked to topics (#41 - 50 )
SWI3 SWP82 TAF10 TAF12 TAF14 TAF5 TAF6 TAF9 TRA1 UBP8
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Function/Process blue ball blue ball blue ball
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