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Bean JM, et al.  (2005) High functional overlap between MluI cell-cycle box binding factor and Swi4/6 cell-cycle box binding factor in the G1/S transcriptional program in Saccharomyces cerevisiae. Genetics 171(1):49-61

Abstract: In budding yeast, many genes are induced early in the cell cycle. Induction of these genes has been predominantly attributed to two transcription factors, Swi4-Swi6 (SBF) and Mbp1-Swi6 (MBF). Swi4 and Mbp1 are related DNA-binding proteins with dissimilar target sequences. For most G1/S-regulated genes that we tested in a cdc20 block-release protocol for cell cycle synchronization, removal of both Swi4 and Mbp1 was necessary and sufficient to essentially eliminate cell-cycle-regulated expression. Neither detectable SBF nor MBF binding sites (SCBs or MCBs) in the promoters nor available genome-wide promoter occupancy data consistently explain this functional overlap. The overlapping ability of these transcription factors to regulate many promoters with very similar cell-cycle kinetics may provide robustness to the G1/S transcriptional response, but poses a puzzle with respect to promoter-transcription factor specificity. In addition, for some genes, deletion of Mbp1 or Swi4 enhances transcription, suggesting these factors can also function as transcriptional repressors. Finally, we observe residual G1/S transcriptional regulation in the absence of Swi4 and Mbp1.

Status: Published Type: Journal Article PubMed ID: 15965243

Topics addressed in this paper

Number of different genes curated to this paper: 30

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Topics Genes linked to topics (#1 - 10 )
CDC21 CDC45 CDC6 CLB2 CLB5 CLN2 CLN3 CWP1 DUN1 ELO1
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Topics Genes linked to topics (#11 - 20 )
ERP3 EXG1 HCM1 HTA2 MBP1 MSB2 PCL2 PLM2 PUP3 RAD27
Additional Literature blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
Cell Cycle Phase Involved blue ball
Cellular Location blue ball
Function/Process blue ball
Genetic Interactions blue ball
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Primary Literature blue ball
Protein-Nucleic Acid Interactions blue ball
Regulation of blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Transcription blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

Topics Genes linked to topics (#21 - 30 )
RNR1 SIC1 SIM1 SPT21 SWI4 SWI5 SWI6 TOS4 YHP1 YOX1
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Cell Cycle Phase Involved blue ball
Cellular Location blue ball
DNA/RNA Sequence Features blue ball blue ball
Function/Process blue ball blue ball
Genetic Interactions blue ball
Mutants/Phenotypes blue ball
Primary Literature blue ball blue ball blue ball
Protein-Nucleic Acid Interactions blue ball blue ball blue ball
Regulation of blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Transcription blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball

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