Sambade M, et al. (2005) A genomic screen for yeast vacuolar membrane ATPase mutants. Genetics 170(4):1539-51
Abstract: V-ATPases acidify multiple organelles, and yeast mutants lacking V-ATPase activity exhibit a distinctive set of growth defects. To better understand the requirements for organelle acidification and the basis of these growth phenotypes, ~4700 yeast deletion mutants were screened for growth defects at pH 7.5 in 60 mM CaCl2. In addition to 13 of 16 mutants lacking known V-ATPase subunits or assembly factors, 50 additional mutants were identified. Sixteen of these also grew poorly in non-fermentable carbon sources, like the known V-ATPase mutants, and were analyzed further. The cwh36Delta mutant exhibited the strongest phenotype; this mutation proved to disrupt a previously uncharacterized V-ATPase subunit. A small subset of the mutations implicated in vacuolar protein sorting, vps34Delta, vps15Delta, vps45Delta, and vps16Delta, caused both Vma- growth phenotypes and lower V-ATPase activity in isolated vacuoles, as did the shp1Delta mutation, implicated in both protein sorting and regulation of the Glc7p protein phosphatase. These proteins may regulate V-ATPase targeting and/or activity. Eight mutants showed a Vma- growth phenotype but no apparent defect in vacuolar acidification. Like V-ATPase-deficient mutants, most of these mutants rely on calcineurin for growth, particularly at high pH. A requirement for constitutive calcineurin activation may be the predominant physiological basis of the Vma- growth phenotype.
| Status: Published | Type: Journal Article | PubMed ID: 15937126 |
Topics addressed in this paper
Number of different genes curated to this paper: 49
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ADA2 | AFT1 | ANP1 | ARO1 | CAK1 | CKB2 | CLC1 | CRZ1 | CTR1 | CYS4 | ||
| Additional Literature | | | | | | | | | | | |
| Large-scale phenotype analysis |
| ||||||||||
| Mutants/Phenotypes | | | | | | | | | | | |
| Omics |
| ||||||||||
| Strains/Constructs | | | | | | | | | | | |
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| GET2 | GLY1 | ILV1 | KEX2 | KRE1 | LDB7 | NGG1 | PET20 | PHO2 | PHO4 | |
| Additional Literature | | | | | | | | | | |
| Alias | | |||||||||
| Mutants/Phenotypes | | | | | | | | | | |
| Strains/Constructs | | | | | | | | | | |
| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| PHO81 | PHO85 | PTC1 | RIB4 | RNR1 | RPB4 | SHP1 | SNF5 | SNF6 | SWI3 | |
| Additional Literature | | | | | | | | | | |
| Mutants/Phenotypes | | | | | | | | | | |
| Strains/Constructs | | | | | | | | | | |
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Genes linked to topics (#31 - 40 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| TAT1 | TRP1 | TRP2 | TRP3 | TRP4 | TRP5 | VMA3 | VMA5 | VMA9 | VPS15 | |
| Additional Literature | | | | | | | | | | |
| Mutants/Phenotypes | | | | | | | | | | |
| Strains/Constructs | | | | | | | | | | |
| Topics | Genes linked to topics (#41 - 49 ) | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| VPS16 | VPS34 | VPS45 | VPS54 | YDR114C | YEL045C | YJL175W | YMR031W-A | ZAP1 | |
| Additional Literature | | | | | | | | ||
| Mutants/Phenotypes | | | | | | | | | |
| Primary Literature | | | |||||||
| Strains/Constructs | | | | | | | | | |





