Galgoczy DJ, et al. (2004) Genomic dissection of the cell-type-specification circuit in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 101(52):18069-74
Abstract: The budding yeast Saccharomyces cerevisiae has three cell types (a cells, alpha cells, and a/alpha cells), each of which is specified by a unique combination of transcriptional regulators. This transcriptional circuit has served as an important model for understanding basic features of the combinatorial control of transcription and the specification of cell type. Here, using genome-wide chromatin immunoprecipitation, transcriptional profiling, and phylogenetic comparisons, we describe the complete cell-type-specification circuit for S. cerevisiae. We believe this work represents a complete description of cell-type specification in a eukaryote.
| Status: Published | Type: Journal Article | PubMed ID: 15604142 |
Topics addressed in this paper
Number of different genes curated to this paper: 31
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| Topics | Topics not linked to Genes | Genes linked to topics (#1 - 10 ) | |||||||||
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| AGA2 | AMN1 | AXL1 | BAR1 | CCW12 | DDR2 | FAR1 | FUS3 | GPA1 | HO | ||
| Additional Literature | | | | | | | | | | | |
| DNA/RNA Sequence Features | | | | | | | | | | | |
| Genomic co-immunoprecipitation study |
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| Genomic expression study |
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| Omics |
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| Regulation of | | | | | | | | | | | |
| RNA Levels and Processing | | | | | | | | | | | |
| Transcription | | | | | | | | | | | |
| Topics | Genes linked to topics (#11 - 20 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| HOG1 | ICS2 | MATA1 | MATALPHA1 | MATALPHA2 | MCM1 | MF(ALPHA)1 | MF(ALPHA)2 | MFA1 | MFA2 | |
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| DNA/RNA Sequence Features | | | | | | | | |||
| Function/Process | | | | |||||||
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| Protein-Nucleic Acid Interactions | | | ||||||||
| Regulation of | | | | | | | | |||
| Regulatory Role | | | | |||||||
| RNA Levels and Processing | | | | | | | | |||
| Substrates/Ligands/Cofactors | | | ||||||||
| Transcription | | | | | | | | |||
| Topics | Genes linked to topics (#21 - 30 ) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| NEJ1 | RDH54 | SAG1 | STE18 | STE2 | STE3 | STE4 | STE5 | STE6 | YLR040C | |
| Additional Literature | | | | | | | | | | |
| DNA/RNA Sequence Features | | | | | | | | | | |
| Primary Literature | | |||||||||
| Regulation of | | | | | | | | | | |
| RNA Levels and Processing | | | | | | | | | | |
| Transcription | | | | | | | | | | |
- To find other papers on a gene and topic, click on the colored ball in the appropriate box.
- displays other papers with information about that topic for that gene.
- displays other papers in SGD that are associated with that topic.
The topic is addressed in these papers but does not describe a specific gene or chromosomal feature.
- To go to the Locus page for a gene, click on the gene name.
| Topics | Genes linked to topics (#31 ) |
|---|---|
| YLR041W | |
| Additional Literature | |
| DNA/RNA Sequence Features | |
| Regulation of | |
| RNA Levels and Processing | |
| Transcription | |







