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Audhya A, et al.  (2004) Genome-wide lethality screen identifies new PI4,5P2 effectors that regulate the actin cytoskeleton. EMBO J 23(19):3747-57

Abstract: To further understand the roles played by the essential phosphoinositide PI4,5P(2), we have used a synthetic lethal analysis, which systematically combined the mss4(ts) mutation, partially defective in PI4P 5-kinase activity, with each of approximately 4700 deletion mutations. This genomic screening technique uncovered numerous new candidate effectors and regulators of PI4,5P(2) in yeast. In particular, we identified Slm1 (Yil105c), a previously uncharacterized PI4,5P(2) binding protein. Like Mss4, Slm1 and its homolog Slm2 (Ynl047c) were required for actin cytoskeleton polarization and viability. Co-immunoprecipitation experiments revealed that Slm1 interacts with a component of TORC2, a Tor2 kinase-containing complex, which also regulates the actin cytoskeleton. Consistent with these findings, phosphorylation of Slm1 and Slm2 was dependent on TORC2 protein kinase activity, both in vivo and in vitro, and Slm1 localization required both PI4,5P(2) and functional TORC2. Together, these data suggest that Slm1 and Slm2 function downstream of PI4,5P(2) and the TORC2 kinase pathway to control actin cytoskeleton organization.

Status: Published Type: Journal Article PubMed ID: 15372071

Topics addressed in this paper

Number of different genes curated to this paper: 31

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Topics Topics not linked to Genes Genes linked to topics (#1 - 10 )
ACT1 ATG18 AVO2 BOI2 CAP1 CAP2 CPR7 GIM3 GIM4 HSC82
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Omics yg ball
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Topics Genes linked to topics (#11 - 20 )
MCK1 MSO1 MSS4 MYO5 PAC10 PKC1 ROM2 SAC7 SEC4 SLM1
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Topics Genes linked to topics (#21 - 30 )
SLM2 SLM3 SLM4 SLM5 SLM6 SNC2 STI1 SYT1 TOR2 VID22
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Cellular Location blue ball
Function/Process blue ball blue ball
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Primary Literature blue ball blue ball blue ball blue ball
Protein Processing/Modification/Regulation blue ball
Protein Sequence Features blue ball
Protein-protein Interactions blue ball
Strains/Constructs blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball blue ball
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Topics Genes linked to topics (#31 )
YDJ1
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