YDR089W Domains/Motifs and Signal Peptides

This page contains a summary of information for Saccharomyces cerevisiae proteins which share domains/motifs in common with the target protein, listed above. Coordinate information for proteins with predicted transmembrane domains and signal peptides is also listed.

To directly search external databases for Ydr089wp domain/motif information see the external links section.

Proteome Browser

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Shared domains/motifs

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This table lists proteins that share domains/motifs in common with those found in Ydr089wp , and a list of domains/motifs that are not shared. Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGERFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ydr089wp domain/motif information see the external links section.

Last updated on 2010-11-23

Other Saccharomyces cerevisiae proteins that contain motifs found in Ydr089wp
Protein	Motifs in common with Ydr089wp	Other motifs in this protein (but not in Ydr089wp )
Pho87p	Pfam PF03105: SPX	PANTHER PTHR10283: PTHR10283 PANTHER PTHR10283:SF37: PTHR10283:SF37 Pfam PF03600: CitMHS
Vtc2p	Pfam PF03105: SPX	PANTHER PTHR10783:SF3: PTHR10783:SF3 PANTHER PTHR10783: PTHR10783
Pho81p	Pfam PF03105: SPX	SUPERFAMILY SSF48403: ANK PROSITE PS50297: ANK_REP_REGION SMART SM00248: ANK PROSITE PS50088: ANK_REPEAT PRINTS PR01415: ANKYRIN PANTHER PTHR10783: PTHR10783 Gene3D G3DSA:1.25.40.20: ANK Pfam PF00023: Ank PANTHER PTHR10783:SF1: PTHR10783:SF1
Syg1p	Pfam PF03105: SPX	Pfam PF03124: EXS PANTHER PTHR10783:SF8: PTHR10783:SF8 PANTHER PTHR10783: PTHR10783
Vtc4p	Pfam PF03105: SPX	PANTHER PTHR10783:SF3: XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR VTC4 PANTHER PTHR10783: XENOTROPIC AND POLYTROPIC MURINE LEUKEMIA VIRUS RECEPTOR Pfam PF09359: VTC
Pho90p	Pfam PF03105: SPX	PANTHER PTHR10283: PTHR10283 PANTHER PTHR10283:SF37: PTHR10283:SF37 Pfam PF03600: CitMHS
Pho91p	Pfam PF03105: SPX	PANTHER PTHR10283: PTHR10283 PANTHER PTHR10283:SF37: PTHR10283:SF37 Pfam PF03600: CitMHS
Vtc3p	Pfam PF03105: SPX	PANTHER PTHR10783:SF3: PTHR10783:SF3 PANTHER PTHR10783: PTHR10783
Gde1p	Pfam PF03105: SPX	SUPERFAMILY SSF48403: ANK PANTHER PTHR22958: PTHR22958 PROSITE PS50297: ANK_REP_REGION Gene3D G3DSA:3.20.20.190: G3DSA:3.20.20.190 SMART SM00248: ANK PROSITE PS50088: ANK_REPEAT PRINTS PR01415: ANKYRIN Gene3D G3DSA:1.25.40.20: ANK Pfam PF03009: GDPD Pfam PF00023: Ank SUPERFAMILY SSF51695: SSF51695

Unique domains/motifs

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This table lists domains/motifs that are unique to Ydr089wp . Domains/Motifs were determined by comparing the Saccharomyces cerevisiae protein sequence against the sequences in the Interpro database, using the Interpro scan (iprscan) program. The Interpro database integrates motif and domain information from PROSITE, PRINTS, Pfam, ProDom, SMART, TIGERFAMs, PIR SUPERFAMILY, Gene3D, and PANTHER databases.

To directly search external databases for Ydr089wp domain/motif information see the external links section.

Last updated on 2010-11-23

There are no unique domains/motifs predicted for Ydr089wp .

Transmembrane Domains

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This table lists coordinates for transmembrane domain(s), as predicted by version 2.0 using TMHMM, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU.

Predicted Transmembane Domain(s) (Click on image for expanded interactive view)	Amino Acid Coordinate(s)

	776 - 798
	811 - 833
	843 - 865

Signal Peptide(s)

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This table lists coordinates for signal peptide(s), as predicted using version 3.0 of SignalP, an application available at The Center for Biological Sequence Analysis at the Technical University of Denmark DTU. Cleavage typically occurs on the carboxy side of the predicted site.

There are no signal peptide(s) predicted for Ydr089wp .

External Links

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The following external links can be used to directly search external databases for domain/motif information for Ydr089wp .

SGD^tm pages Database Copyright © 1997-2010 The Board of Trustees of Leland Stanford Junior University. Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The SGD project at Stanford University is supported by a Genome Research Resource Grant from the US National Human Genome Research Institute, part of the US National Institutes of Health.